Repository of Research and Investigative Information

Repository of Research and Investigative Information

Shahid Sadoughi University of Medical Sciences

Rational design of a new variant of Reteplase with optimized physicochemical profile and large-scale production in Escherichia coli

(2022) Rational design of a new variant of Reteplase with optimized physicochemical profile and large-scale production in Escherichia coli. World Journal of Microbiology and Biotechnology.

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Official URL: https://www.scopus.com/inward/record.uri?eid=2-s2....

Abstract

Structural engineering of the recombinant thrombolytic drug, Reteplase, and its cost-effective production are important goals in the pharmaceutical industry. In this study, a single-point mutant of the protein was rationally designed and evaluated in terms of physicochemical characteristics, enzymatic activity, as well as large-scale production settings. An accurate homology model of Reteplase was used as the input to appropriate tools to identify the aggregation-prone sites, while considering the structural stability. Selected variants underwent extensive molecular dynamic simulations (total 540 ns) to assess their solvation profile and their thermal stability. The Reteplase-fibrin interaction was investigated by docking. The best variant was expressed in E. coli, and Box-Behnken design was used through response surface methodology to optimize its expression conditions. M72R mutant demonstrated appropriate stability, enhanced enzymatic activity (p < 0.05), and strengthened binding to fibrin, compared to the wild type. The optimal conditions for the variant's production in a bioreactor was shown to be 37 ºC, induction with 0.5 mM IPTG, for 2 h of incubation. Under these conditions, the final amount of the produced enzyme was increased by about 23 mg/L compared to the wild type, with an increase in the enzymatic activity by about 2 IU/mL. This study thus offered a new Reteplase variant with nearly all favorable properties, except solubility. The impact of temperature and incubation time on its large-scale production were underlined as well.

Item Type: Article
Keywords: Cost effectiveness; Cost engineering; Escherichia coli; Stability; Surface properties, Condition; Enzymatic activities; Expression optimization; Large scale productions; Optimisations; Physicochemical profile; Rational design; Response-surface methodology; Reteplase; Wild types, Molecular dynamics, fibrinolytic agent; recombinant protein; reteplase; tissue plasminogen activator, bioreactor; biosynthesis; biotechnology; chemistry; Escherichia coli; gene expression regulation; genetics; metabolic engineering; metabolism; molecular docking; molecular dynamics; mutagenesis; protein folding, Bioreactors; Biotechnology; Escherichia coli; Fibrinolytic Agents; Gene Expression Regulation, Bacterial; Metabolic Engineering; Molecular Docking Simulation; Molecular Dynamics Simulation; Mutagenesis; Protein Folding; Recombinant Proteins; Tissue Plasminogen Activator
Journal or Publication Title: World Journal of Microbiology and Biotechnology
Volume: 38
Number: 2
Depositing User: ms soheila Bazm
URI: http://eprints.ssu.ac.ir/id/eprint/13024

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